Just thought I would post this issue I've just experienced.
9800 appliances with extra interface modules configured as VSX running R82 with JHFA41.
Symptom:
When switchports are enabled which lead to the interfaces on the 9800 it appear that this is up, however on the 9800 side the link status is down. Visually on the switch where the port should be green, this is orange (Note: Onboard interfaces where fine)
Originally I had only one interface showing this issue and after trying different things I powered off/on the appliance via the LOM.
After this, the port started to work normally again, however, now other ports where showing this issue, additionally it was noted that a number of processes had terminated.
I logged a TAC case with Checkpoint (who are still investigating this).
Eventually via the LOM I did a hard reset, and after this everything was good, including the processes. At this point its not clear if this is a hardware issue or a potential undiscovered feature (bug!).
I have 4 units in totally and thus far only seen this on one units, which for me would seem more like hardware issue, but I will wait for Checkpoint to conclude there investigation.